Genome annotation for 428 genomes was retrieved from Ensembl (release 103), Ensembl metazoa (release 50) and Ensembl plants (release50) as of 5/15/2021. Common names (e.g., “Mouse”) are used for some species in Ensembl. In addition, 5090 genomes are annotated based on STRING-db (See list). These genomes are marked as “Mus musculus STRINGdb”. If a genome is annotated in both Ensembl and STRING-db, the Ensembl Genome (e.g., “Mouse”) should be used as it is more up-to-date and contains more information.
| Ensembl (Release 103) | |||
| Taxon ID | Genome(version) | Academic Name | KEGG |
| 28377 | Anole lizard genes (AnoCar2.0) | Anolis carolinensis | acs |
| 7994 | Mexican tetra genes (Astyanax_mexicanus-2.0) | Astyanax mexicanus | amex |
| 9646 | Giant panda genes (ASM200744v2) | Ailuropoda melanoleuca | aml |
| 80972 | Clown anemonefish genes (AmpOce1.0) | Amphiprion ocellaris | aoce |
| 8839 | Mallard genes (ASM874695v1) | Anas platyrhynchos | apla |
| 72004 | Wild yak genes (BosGru_v2.0) | Bos mutus | bom |
| 9913 | Cow genes (ARS-UCD1.2) | Bos taurus | bta |
| 7962 | Common carp genes (common_carp_genome) | Cyprinus carpio | ccar |
| 9838 | Arabian camel genes (CamDro2) | Camelus dromedarius | cdk |
| 6239 | Caenorhabditis elegans genes (WBcel235) | Caenorhabditis elegans | cel |
| 9615 | Dog genes (CanFam3.1) | Canis lupus familiaris | cfa |
| 10029 | Chinese hamster CHOK1GS genes (CHOK1GS_HDv1) | Cricetulus griseus | cge |
| 9925 | Goat genes (ARS1) | Capra hircus | chx |
| 7719 | C.intestinalis genes (KH) | Ciona intestinalis | cin |
| 9483 | Marmoset genes (ASM275486v1) | Callithrix jacchus | cjc |
| 93934 | Japanese quail genes (Coturnix_japonica_2.0) | Coturnix japonica | cjo |
| 7868 | Elephant shark genes (Callorhinchus_milii-6.1.3) | Callorhinchus milii | cmk |
| 8478 | Painted turtle genes (Chrysemys_picta_bellii-3.0.3) | Chrysemys picta bellii | cpic |
| 60711 | Vervet-AGM genes (ChlSab1.1) | Chlorocebus sabaeus | csab |
| 244447 | Tongue sole genes (Cse_v1.0) | Cynoglossus semilaevis | csem |
| 28743 | Sheepshead minnow genes (C_variegatus-1.0) | Cyprinodon variegatus | cvg |
| 9749 | Beluga whale genes (ASM228892v3) | Delphinapterus leucas | dle |
| 7227 | Drosophila melanogaster genes (BDGP6.32) | Drosophila melanogaster | dme |
| 7955 | Zebrafish genes (GRCz11) | Danio rerio | dre |
| 9796 | Horse genes (EquCab3.0) | Equus caballus | ecb |
| 8005 | Electric eel genes (Ee_SOAP_WITH_SSPACE) | Electrophorus electricus | eee |
| 8010 | Northern pike genes (Eluc_v4) | Esox lucius | els |
| 59894 | Flycatcher genes (FicAlb_1.4) | Ficedula albicollis | fab |
| 9685 | Cat genes (Felis_catus_9.0) | Felis catus | fca |
| 48883 | Medium ground-finch genes (GeoFor_1.0) | Geospiza fortis | gfr |
| 9031 | Chicken genes (GRCg6a) | Gallus gallus | gga |
| 9595 | Gorilla genes (gorGor4) | Gorilla gorilla gorilla | ggo |
| 109280 | Tiger tail seahorse genes (H_comes_QL1_v1) | Hippocampus comes | hcq |
| 10181 | Naked mole-rat female genes (HetGla_female_1.0) | Heterocephalus glaber | hgl |
| 9606 | Human genes (GRCh38.p13) | Homo sapiens | hsa |
| 7998 | Channel catfish genes (IpCoco_1.2) | Ictalurus punctatus | ipu |
| 37003 | Mangrove rivulus genes (ASM164957v1) | Kryptolebias marmoratus | kmr |
| 9785 | Elephant genes (Loxafr3.0) | Loxodonta africana | lav |
| 8187 | Barramundi perch genes (ASB_HGAPassembly_v1) | Lates calcarifer | lcf |
| 7897 | Coelacanth genes (LatCha1) | Latimeria chalumnae | lcm |
| 215358 | Large yellow croaker genes (L_crocea_2.0) | Larimichthys crocea | lco |
| 10089 | Ryukyu mouse genes (CAROLI_EIJ_v1.1) | Mus caroli | mcal |
| 9544 | Macaque genes (Mmul_10) | Macaca mulatta | mcc |
| 9541 | Crab-eating macaque genes (Macaca_fascicularis_6.0) | Macaca fascicularis | mcf |
| 13616 | Opossum genes (ASM229v1) | Monodelphis domestica | mdo |
| 9103 | Turkey genes (Turkey_2.01) | Meleagris gallopavo | mgp |
| 10090 | Mouse genes (GRCm39) | Mus musculus | mmu |
| 10093 | Shrew mouse genes (PAHARI_EIJ_v1.1) | Mus pahari | mpah |
| 106582 | Zebra mbuna genes (M_zebra_UMD2a) | Maylandia zebra | mze |
| 105023 | Turquoise killifish genes (Nfu_20140520) | Nothobranchius furzeri | nfu |
| 1026970 | Upper Galilee mountains blind mole rat genes (S.galili_v1.0) | Nannospalax galili | ngi |
| 61853 | Gibbon genes (Nleu_3.0) | Nomascus leucogenys | nle |
| 9258 | Platypus genes (mOrnAna1.p.v1) | Ornithorhynchus anatinus | oaa |
| 9940 | Sheep (texel) genes (Oar_v3.1) | Ovis aries | oas |
| 9940 | Sheep genes (Oar_rambouillet_v1.0) | Ovis aries | oas |
| 9986 | Rabbit genes (OryCun2.0) | Oryctolagus cuniculus | ocu |
| 8090 | Japanese medaka HdrR genes (ASM223467v1) | Oryzias latipes | ola |
| 8128 | Nile tilapia genes (O_niloticus_UMD_NMBU) | Oreochromis niloticus | onl |
| 74940 | Chinook salmon genes (Otsh_v1.0) | Oncorhynchus tshawytscha | otw |
| 9755 | Sperm whale genes (ASM283717v2) | Physeter catodon | pcad |
| 38626 | Koala genes (phaCin_unsw_v4.1) | Phascolarctos cinereus | pcw |
| 1676925 | Paramormyrops kingsleyae genes (PKINGS_0.1) | Paramormyrops kingsleyae | pki |
| 9157 | Great Tit genes (Parus_major1.1) | Parus major | pmaj |
| 64176 | Common wall lizard genes (PodMur_1.0) | Podarcis muralis | pmua |
| 9601 | Orangutan genes (PPYG2) | Pongo abelii | pon |
| 9691 | Leopard genes (PanPar1.0) | Panthera pardus | ppad |
| 9597 | Bonobo genes (panpan1.1) | Pan paniscus | pps |
| 8081 | Guppy genes (Guppy_female_1.0_MT) | Poecilia reticulata | pret |
| 13735 | Chinese softshell turtle genes (PelSin_1.0) | Pelodiscus sinensis | pss |
| 74533 | Tiger genes (PanTig1.0) | Panthera tigris altaica | ptg |
| 9598 | Chimpanzee genes (Pan_tro_3.0) | Pan troglodytes | ptr |
| 61621 | Black snub-nosed monkey genes (ASM169854v1) | Rhinopithecus bieti | rbb |
| 10116 | Rat genes (Rnor_6.0) | Rattus norvegicus | rno |
| 61622 | Golden snub-nosed monkey genes (Rrox_v1) | Rhinopithecus roxellana | rro |
| 8030 | Atlantic salmon genes (ICSASG_v2) | Salmo salar | sasa |
| 39432 | Bolivian squirrel monkey genes (SaiBol1.0) | Saimiri boliviensis boliviensis | sbq |
| 9135 | Common canary genes (SCA1) | Serinus canaria | scan |
| 41447 | Greater amberjack genes (Sdu_1.0) | Seriola dumerili | sdu |
| 113540 | Asian bonytongue genes (fSclFor1.1) | Scleropages formosus | sfm |
| 75366 | Golden-line barbel genes (SAMN03320097.WGS_v1.1) | Sinocyclocheilus grahami | sgh |
| 9305 | Tasmanian devil genes (mSarHar1.11) | Sarcophilus harrisii | shr |
| 1841481 | Yellowtail amberjack genes (Sedor1) | Seriola lalandi dorsalis | slal |
| 9823 | Pig genes (Sscrofa11.1) | Sus scrofa | ssc |
| 59729 | Zebra finch genes (bTaeGut1_v1.p) | Taeniopygia guttata | tgu |
| 99883 | Tetraodon genes (TETRAODON 8.0) | Tetraodon nigroviridis | tng |
| 31033 | Fugu genes (fTakRub1.2) | Takifugu rubripes | tru |
| 29073 | Polar bear genes (UrsMar_1.0) | Ursus maritimus | umr |
| 9627 | Red fox genes (VulVul2.2) | Vulpes vulpes | vvp |
| 8083 | Platyfish genes (X_maculatus-5.0-male) | Xiphophorus maculatus | xma |
| 8364 | Tropical clawed frog genes (Xenopus_tropicalis_v9.1) | Xenopus tropicalis | xtr |
| 106734 | Abingdon island giant tortoise genes (ASM359739v1) | Chelonoidis abingdonii | |
| 441894 | African ostrich genes (ASM69896v1) | Struthio camelus australis | |
| 10096 | Algerian mouse genes (SPRET_EiJ_v1) | Mus spretus | |
| 30538 | Alpaca genes (vicPac1) | Vicugna pacos | |
| 9994 | Alpine marmot genes (marMar2.1) | Marmota marmota marmota | |
| 48698 | Amazon molly genes (Poecilia_formosa-5.1.2) | Poecilia formosa | |
| 43346 | American bison genes (Bison_UMD1.0) | Bison bison bison | |
| 9643 | American black bear genes (ASM334442v1) | Ursus americanus | |
| 452646 | American mink genes (NNQGG.v01) | Neovison vison | |
| 9999 | Arctic ground squirrel genes (ASM342692v1) | Urocitellus parryii | |
| 96440 | Argentine black and white tegu genes (HLtupMer3) | Salvator merianae | |
| 9361 | Armadillo genes (Dasnov3.0) | Dasypus novemcinctus | |
| 8049 | Atlantic cod genes (gadMor3.0) | Gadus morhua | |
| 7950 | Atlantic herring genes (Ch_v2.0.2) | Clupea harengus | |
| 8502 | Australian saltwater crocodile genes (CroPor_comp1) | Crocodylus porosus | |
| 56723 | Ballan wrasse genes (BallGen_V1) | Labrus bergylta | |
| 144197 | Bicolor damselfish genes (Stegastes_partitus-1.0.2) | Stegastes partitus | |
| 9771 | Blue whale genes (mBalMus1.v2) | Balaenoptera musculus | |
| 8630 | Blue-ringed sea krait genes (latLat_1.0) | Laticauda laticaudata | |
| 8032 | Brown trout genes (fSalTru1.1) | Salmo trutta | |
| 8153 | Burton’s mouthbrooder genes (AstBur1.0) | Haplochromis burtoni | |
| 30611 | Bushbaby genes (OtoGar3) | Otolemur garnettii | |
| 51511 | C.savignyi genes (CSAV 2.0) | Ciona savignyi | |
| 1737458 | Capuchin genes (Cebus_imitator-1.0) | Cebus capucinus imitator | |
| 51154 | Chacoan peccary genes (CatWag_v2_BIUU_UCD) | Catagonus wagneri | |
| 56716 | Channel bull blenny genes (fCotGob3.1) | Cottoperca gobio | |
| 183150 | Chinese medaka genes (ASM858656v1) | Oryzias sinensis | |
| 64144 | Climbing perch genes (fAnaTes1.2) | Anabas testudineus | |
| 8019 | Coho salmon genes (Okis_V2) | Oncorhynchus kisutch | |
| 29139 | Common wombat genes (bare-nosed_wombat_genome_assembly) | Vombatus ursinus | |
| 379532 | Coquerel’s sifaka genes (Pcoq_1.0) | Propithecus coquereli | |
| 10160 | Degu genes (OctDeg1.0) | Octodon degus | |
| 299321 | Denticle herring genes (fDenClu1.1) | Denticeps clupeoides | |
| 286419 | Dingo genes (ASM325472v1) | Canis lupus dingo | |
| 9739 | Dolphin genes (turTru1) | Tursiops truncatus | |
| 30521 | Domestic yak genes (LU_Bosgru_v3.0) | Bos grunniens | |
| 83772 | Donkey genes (ASM303372v1) | Equus asinus asinus | |
| 9568 | Drill genes (Mleu.le_1.0) | Mandrillus leucophaeus | |
| 8840 | Duck genes (CAU_duck1.0) | Anas platyrhynchos platyrhynchos | |
| 8673 | Eastern brown snake genes (EBS10Xv2-PRI) | Pseudonaja textilis | |
| 8154 | Eastern happy genes (fAstCal1.2) | Astatotilapia calliptera | |
| 55149 | Eurasian red squirrel genes (mSciVul1.1) | Sciurus vulgaris | |
| 13489 | European seabass genes (seabass_V1.0) | Dicentrarchus labrax | |
| 9669 | Ferret genes (MusPutFur1.0) | Mustela putorius furo | |
| 8175 | Gilthead seabream genes (fSpaAur1.1) | Sparus aurata | |
| 223781 | Golden eagle genes (bAquChr1.2) | Aquila chrysaetos chrysaetos | |
| 10036 | Golden Hamster genes (MesAur1.0) | Mesocricetus auratus | |
| 7957 | Goldfish genes (ASM336829v1) | Carassius auratus | |
| 1825980 | Goodes thornscrub tortoise genes (rGopEvg1_v1.p) | Gopherus evgoodei | |
| 1328070 | Greater bamboo lemur genes (Prosim_1.0) | Prolemur simus | |
| 59479 | Greater horseshoe bat genes (mRhiFer1_v1.p) | Rhinolophus ferrumequinum | |
| 10141 | Guinea Pig genes (Cavpor3.0) | Cavia porcellus | |
| 7764 | Hagfish genes (Eburgeri_3.2) | Eptatretus burgeri | |
| 9365 | Hedgehog genes (eriEur1) | Erinaceus europaeus | |
| 62062 | Huchen genes (ASM331708v1) | Hucho hucho | |
| 30522 | Hybrid – Bos Indicus genes (UOA_Brahman_1) | Bos indicus x Bos taurus | |
| 9813 | Hyrax genes (proCap1) | Procavia capensis | |
| 35670 | Indian cobra genes (Nana_v5) | Naja naja | |
| 30732 | Indian medaka genes (Om_v0.7.RACA) | Oryzias melastigma | |
| 123683 | Javanese ricefish genes (OJAV_1.1) | Oryzias javanicus | |
| 2489341 | Kakapo genes (bStrHab1_v1.p) | Strigops habroptila | |
| 10020 | Kangaroo rat genes (Dord_2.0) | Dipodomys ordii | |
| 7757 | Lamprey genes (Pmarinus_7.0) | Petromyzon marinus | |
| 445787 | Leishan spiny toad genes (ASM966780v1) | Leptobrachium leishanense | |
| 51337 | Lesser Egyptian jerboa genes (JacJac1.0) | Jaculus jaculus | |
| 9371 | Lesser hedgehog tenrec genes (TENREC) | Echinops telfairi | |
| 9689 | Lion genes (PanLeo1.0) | Panthera leo | |
| 34839 | Long-tailed chinchilla genes (ChiLan1.0) | Chinchilla lanigera | |
| 8103 | Lumpfish genes (fCycLum1.pri) | Cyclopterus lumpus | |
| 32507 | Lyretail cichlid genes (NeoBri1.0) | Neolamprologus brichardi | |
| 8663 | Mainland tiger snake genes (TS10Xv2-PRI) | Notechis scutatus | |
| 303518 | Makobe Island cichlid genes (PunNye1.0) | Pundamilia nyererei | |
| 37293 | Ma’s night monkey genes (Anan_2.0) | Aotus nancymaae | |
| 132908 | Megabat genes (pteVam1) | Pteropus vampyrus | |
| 59463 | Microbat genes (Myoluc2.0) | Myotis lucifugus | |
| 61819 | Midas cichlid genes (Midas_v5) | Amphilophus citrinellus | |
| 30608 | Mouse Lemur genes (Mmur_3.0) | Microcebus murinus | |
| 8078 | Mummichog genes (Fundulus_heteroclitus-3.0.2) | Fundulus heteroclitus | |
| 40151 | Narwhal genes (NGI_Narwhal_1) | Monodon monoceros | |
| 230844 | Northern American deer mouse genes (HU_Pman_2.1) | Peromyscus maniculatus bairdii | |
| 9555 | Olive baboon genes (Panu_3.0) | Papio anubis | |
| 161767 | Orange clownfish genes (Nemo_v1) | Amphiprion percula | |
| 9545 | Pig-tailed macaque genes (Mnem_1.0) | Macaca nemestrina | |
| 9978 | Pika genes (OchPri2.0-Ens) | Ochotona princeps | |
| 283035 | Pike-perch genes (SLUC_FBN_1) | Sander lucioperca | |
| 586833 | Pinecone soldierfish genes (fMyrMur1.1) | Myripristis murdjan | |
| 132585 | Pink-footed goose genes (ASM259213v1) | Anser brachyrhynchus | |
| 79684 | Prairie vole genes (MicOch1.0) | Microtus ochrogaster | |
| 8022 | Rainbow trout genes (Omyk_1.0) | Oncorhynchus mykiss | |
| 42514 | Red-bellied piranha genes (Pygocentrus_nattereri-1.0.2) | Pygocentrus nattereri | |
| 27687 | Reedfish genes (fErpCal1.1) | Erpetoichthys calabaricus | |
| 4932 | Saccharomyces cerevisiae genes (R64-1-1) | Saccharomyces cerevisiae | |
| 48699 | Sailfin molly genes (P_latipinna-1.0) | Poecilia latipinna | |
| 42254 | Shrew genes (sorAra1) | Sorex araneus | |
| 158456 | Siamese fighting fish genes (fBetSpl5.2) | Betta splendens | |
| 68415 | Siberian musk deer genes (MosMos_v2_BIUU_UCD) | Moschus moschiferus | |
| 9358 | Sloth genes (choHof1) | Choloepus hoffmanni | |
| 9531 | Sooty mangabey genes (Caty_1.0) | Cercocebus atys | |
| 80966 | Spiny chromis genes (ASM210954v1) | Acanthochromis polyacanthus | |
| 7918 | Spotted gar genes (LepOcu1) | Lepisosteus oculatus | |
| 43179 | Squirrel genes (SpeTri2.0) | Ictidomys tridecemlineatus | |
| 10103 | Steppe mouse genes (MUSP714) | Mus spicilegus | |
| 69293 | Stickleback genes (BROAD S1) | Gasterosteus aculeatus | |
| 1868482 | Tarsier genes (Tarsius_syrichta-2.0.1) | Carlito syrichta | |
| 2587831 | Three-toed box turtle genes (T_m_triunguis-2.0) | Terrapene carolina triunguis | |
| 37347 | Tree Shrew genes (tupBel1) | Tupaia belangeri | |
| 8508 | Tuatara genes (ASM311381v1) | Sphenodon punctatus | |
| 52904 | Turbot genes (ASM318616v1) | Scophthalmus maximus | |
| 42100 | Vaquita genes (mPhoSin1.pri) | Phocoena sinus | |
| 9315 | Wallaby genes (Meug_1.0) | Notamacropus eugenii | |
| 84702 | Yarkand deer genes (CEY_v1) | Cervus hanglu yarkandensis | |
| 205130 | Zig-zag eel genes (fMasArm1.2) | Mastacembelus armatus | |
| Ensembl Plants(Release 50) | |||
| Taxon ID | Genome(version) | Academic Name | KEGG |
| 81972 | Arabidopsis lyrata genes (v.1.0) | Arabidopsis lyrata subsp. lyrata | aly |
| 4686 | Asparagus officinalis genes (Aspof.V1) | Asparagus officinalis | aof |
| 3702 | Arabidopsis thaliana genes (TAIR10) | Arabidopsis thaliana | ath |
| 13333 | Amborella trichopoda genes (AMTR1.0) | Amborella trichopoda | atr |
| 200361 | Aegilops tauschii genes (Aet v4.0) | Aegilops tauschii subsp. strangulata | ats |
| 15368 | Brachypodium distachyon genes (Brachypodium_distachyon_v3.0) | Brachypodium distachyon | bdi |
| 3708 | Brassica napus genes (AST_PRJEB5043_v1) | Brassica napus | bna |
| 109376 | Brassica oleracea genes (BOL) | Brassica oleracea var. oleracea | boe |
| 3711 | Brassica rapa genes (Brapa_1.0) | Brassica rapa | brp |
| 3555 | Beta vulgaris genes (RefBeet-1.2.2) | Beta vulgaris subsp. vulgaris | bvg |
| 4072 | Capsicum annuum genes (ASM51225v2) | Capsicum annuum | cann |
| 59895 | Cynara cardunculus genes (CcrdV1) | Cynara cardunculus var. scolymus | ccav |
| 2769 | Chondrus crispus genes (ASM35022v2) | Chondrus crispus | ccp |
| 85681 | Citrus clementina genes (Citrus_clementina_v1.0) | Citrus clementina | cic |
| 280699 | Cyanidioschyzon merolae genes (ASM9120v1) | Cyanidioschyzon merolae strain 10D | cme |
| 3656 | Cucumis melo genes (Melonv4) | Cucumis melo | cmo |
| 63459 | Chenopodium quinoa genes (ASM168347v1) | Chenopodium quinoa | cqi |
| 3055 | Chlamydomonas reinhardtii genes (Chlamydomonas_reinhardtii_v5.5) | Chlamydomonas reinhardtii | cre |
| 90675 | Camelina sativa genes (Cs) | Camelina sativa | csat |
| 3659 | Cucumis sativus genes (ASM407v2) | Cucumis sativus | csv |
| 79200 | Daucus carota genes (ASM162521v1) | Daucus carota subsp. sativus | dcr |
| 71139 | Eucalyptus grandis genes (Egrandis1_0) | Eucalyptus grandis | egr |
| 72664 | Eutrema salsugineum genes (Eutsalg1_0) | Eutrema salsugineum | eus |
| 3847 | Glycine max genes (Glycine_max_v2.1) | Glycine max | gmx |
| 29730 | Gossypium raimondii genes (Graimondii2_0_v6) | Gossypium raimondii | gra |
| 130081 | Galdieria sulphuraria genes (ASM34128v1) | Galdieria sulphuraria | gsl |
| 4232 | Helianthus annuus genes (HanXRQr1.0) | Helianthus annuus | han |
| 3871 | Lupinus angustifolius genes (LupAngTanjil_v1.0) | Lupinus angustifolius | lang |
| 3750 | Malus domestica Golden genes (ASM211411v1) | Malus domestica | mdm |
| 3983 | Manihot esculenta genes (Manihot esculenta v6) | Manihot esculenta | mesc |
| 3880 | Medicago truncatula genes (MedtrA17_4.0) | Medicago truncatula | mtr |
| 214687 | Musa acuminata genes (ASM31385v1) | Musa acuminata subsp. malaccensis | mus |
| 49451 | Nicotiana attenuata genes (NIATTr2) | Nicotiana attenuata | nau |
| 4533 | Oryza brachyantha genes (Oryza_brachyantha.v1.4b) | Oryza brachyantha | obr |
| 158386 | Olea europaea var. sylvestris genes (O_europaea_v1) | Olea europaea var. sylvestris | oeu |
| 436017 | Ostreococcus lucimarinus genes (ASM9206v1) | Ostreococcus lucimarinus CCE9901 | olu |
| 39947 | Oryza sativa Japonica Group genes (IRGSP-1.0) | Oryza sativa Japonica Group | osa |
| 42229 | Prunus avium genes (PAV_r1.0) | Prunus avium | pavi |
| 3694 | Populus trichocarpa genes (Pop_tri_v3) | Populus trichocarpa | pop |
| 3760 | Prunus persica genes (Prunus_persica_NCBIv2) | Prunus persica | pper |
| 3218 | Physcomitrella patens genes (Phypa V3) | Physcomitrium patens | ppp |
| 3469 | Papaver somniferum genes (ASM357369v1) | Papaver somniferum | psom |
| 3885 | Phaseolus vulgaris genes (PhaVulg1_0) | Phaseolus vulgaris | pvu |
| 74649 | Rosa chinensis genes (RchiOBHm-V2) | Rosa chinensis | rcn |
| 4558 | Sorghum bicolor genes (Sorghum_bicolor_NCBIv3) | Sorghum bicolor | sbi |
| 4555 | Setaria italica genes (Setaria_italica_v2.0) | Setaria italica | sita |
| 4081 | Solanum lycopersicum genes (SL3.0) | Solanum lycopersicum | sly |
| 88036 | Selaginella moellendorffii genes (v1.0) | Selaginella moellendorffii | smo |
| 4113 | Solanum tuberosum genes (SolTub_3.0) | Solanum tuberosum | sot |
| 3641 | Theobroma cacao Belizian Criollo B97-61/B2 genes (Criollo_cocoa_genome_V2) | Theobroma cacao | tcc |
| 3641 | Theobroma cacao Matina 1-6 genes (Theobroma_cacao_20110822) | Theobroma cacao | tcc |
| 3914 | Vigna angularis genes (Vigan1.1) | Vigna angularis | var |
| 3916 | Vigna radiata genes (Vradiata_ver6) | Vigna radiata var. radiata | vra |
| 29760 | Vitis vinifera genes (12X) | Vitis vinifera | vvi |
| 4577 | Zea mays genes (B73 RefGen_v4) | Zea mays | zma |
| 1590841 | Actinidia chinensis genes (Red5_PS1_1.69.0) | Actinidia chinensis var. chinensis | |
| 4615 | Ananas comosus genes (F153) | Ananas comosus | |
| 63677 | Arabidopsis halleri genes (Ahal2.2) | Arabidopsis halleri subsp. gemmifera | |
| 50452 | Arabis alpina genes (A_alpina_V4) | Arabis alpina | |
| 3483 | Cannabis sativa female genes (cs10) | Cannabis sativa | |
| 69332 | Chara braunii genes (Cbr_1.0) | Chara braunii | |
| 3654 | Citrullus lanatus genes (Cla97_v1) | Citrullus lanatus | |
| 49390 | Coffea canephora genes (AUK_PRJEB4211_v1) | Coffea canephora str. DH200-94 | |
| 210143 | Corchorus capsularis genes (CCACVL1_1.0) | Corchorus capsularis | |
| 55577 | Dioscorea rotundata genes (TDr96_F1_v2_PseudoChromosome) | Dioscorea rotundata | |
| 38414 | Eragrostis curvula genes (CERZOS_E.curvula1.0) | Eragrostis curvula | |
| 110835 | Eragrostis tef genes (ASM97063v1) | Eragrostis tef | |
| 112509 | Hordeum vulgare genes (IBSC v2) | Hordeum vulgare subsp. vulgare | |
| 112509 | Hordeum vulgare GoldenPromise genes (GPv1) | Hordeum vulgare subsp. vulgare | |
| 35885 | Ipomoea triloba genes (ASM357664v1) | Ipomoea triloba | |
| 63787 | Kalanchoe fedtschenkoi genes (K_fedtschenkoi_M2_v1) | Kalanchoe fedtschenkoi | |
| 77586 | Leersia perrieri genes (Lperr_V1.4) | Leersia perrieri | |
| 3197 | Marchantia polymorpha genes (Marchanta_polymorpha_v1) | Marchantia polymorpha str. Tak-1 | |
| 210225 | Nymphaea colorata genes (ASM883128v1) | Nymphaea colorata | |
| 65489 | Oryza barthii genes (O.barthii_v1) | Oryza barthii | |
| 4538 | Oryza glaberrima genes (Oryza_glaberrima_V1) | Oryza glaberrima | |
| 40148 | Oryza glumipatula genes (Oryza_glumaepatula_v1.5) | Oryza glumipatula | |
| 4528 | Oryza longistaminata genes (O_longistaminata_v1.0) | Oryza longistaminata | |
| 40149 | Oryza meridionalis genes (Oryza_meridionalis_v1.3) | Oryza meridionalis | |
| 4536 | Oryza nivara genes (Oryza_nivara_v1.0) | Oryza sativa f. spontanea | |
| 4537 | Oryza punctata genes (Oryza_punctata_v1.2) | Oryza punctata | |
| 4529 | Oryza rufipogon genes (OR_W1943) | Oryza rufipogon | |
| 39946 | Oryza sativa Indica Group genes (ASM465v1) | Oryza sativa Indica Group | |
| 206008 | Panicum hallii FIL2 genes (PHallii_v3.1) | Panicum hallii str. FIL2 | |
| 1504633 | Panicum hallii HAL2 genes (PhalliiHAL_v2.1) | Panicum hallii var. hallii str. HAL2 | |
| 55513 | Pistacia vera genes (PisVer_v2) | Pistacia vera | |
| 3755 | Prunus dulcis genes (ALMONDv2) | Prunus dulcis | |
| 97700 | Quercus lobata genes (ValleyOak3.0) | Quercus lobata | |
| 62335 | Saccharum spontaneum genes (Sspon.HiC_chr_asm) | Saccharum spontaneum | |
| 4556 | Setaria viridis genes (Setaria_viridis_v2.0) | Setaria viridis | |
| 57577 | Trifolium pratense genes (Trpr) | Trifolium pratense | |
| 4565 | Triticum aestivum Arinalrfor genes (PGSBv2.0_Arinalrfor) | Triticum aestivum | |
| 4565 | Triticum aestivum Cadenza genes (TGAC_cadenza) | Triticum aestivum | |
| 4565 | Triticum aestivum Claire genes (TGAC_paragon) | Triticum aestivum | |
| 4565 | Triticum aestivum genes (IWGSC) | Triticum aestivum | |
| 4565 | Triticum aestivum Jagger genes (PGSBv2.0_Jagger) | Triticum aestivum | |
| 4565 | Triticum aestivum Julius genes (PGSBv2.0_Julius) | Triticum aestivum | |
| 4565 | Triticum aestivum Lancer genes (PGSBv2.0_Lancer) | Triticum aestivum | |
| 4565 | Triticum aestivum Landmark genes (PGSBv2.0_Landmark) | Triticum aestivum | |
| 4565 | Triticum aestivum Mace genes (PGSBv2.0_Mace) | Triticum aestivum | |
| 4565 | Triticum aestivum Norin61 genes (PGSBv2.0_Norin61) | Triticum aestivum | |
| 4565 | Triticum aestivum Paragon genes (EI_paragon) | Triticum aestivum | |
| 4565 | Triticum aestivum Robigus genes (TGAC_robigus) | Triticum aestivum | |
| 4565 | Triticum aestivum Stanley genes (PGSBv2.0_Stanley) | Triticum aestivum | |
| 4565 | Triticum aestivum Sy Mattis genes (PGSBv2.0_Mattis) | Triticum aestivum | |
| 4565 | Triticum aestivum Weebill genes (EI_WeebilV1) | Triticum aestivum | |
| 85692 | Triticum dicoccoides genes (WEWSeq v.1.0) | Triticum dicoccoides | |
| 58933 | Triticum spelta genes (PGSBv2.0_Spelta) | Triticum spelta | |
| 4567 | Triticum turgidum genes (svevo) | Triticum turgidum subsp. durum | |
| 4572 | Triticum urartu genes (ASM34745v1) | Triticum urartu | |
| Ensembl Metazoa(Release 50) | |||
| Taxon ID | Genome(version) | Academic Name | KEGG |
| 7159 | Aedes aegypti (LVP_AGWG) genes (AaegL5) | Aedes aegypti | aag |
| 7160 | Aedes albopictus genes (AaloF1) | Aedes albopictus | aalb |
| 12957 | Atta cephalotes genes (Attacep1.0) | Atta cephalotes | acep |
| 7165 | Anopheles gambiae genes (AgamP4) | Anopheles gambiae | aga |
| 7460 | Apis mellifera (DH4) genes (Amel_HAv3.1) | Apis mellifera | ame |
| 7029 | Acyrthosiphon pisum genes (Acyr_2.0) | Acyrthosiphon pisum | api |
| 400682 | Amphimedon queenslandica genes (Aqu1) | Amphimedon queenslandica | aqu |
| 132113 | Bombus impatiens genes (BIMP_2.0) | Bombus impatiens | bim |
| 7091 | Bombyx mori genes (ASM15162v1) | Bombyx mori | bmor |
| 6279 | Brugia malayi genes (Bmal-4.0) | Brugia malayi | bmy |
| 7038 | Bemisia tabaci (ASIAII-5) genes (ASIAII5_n227_616Mb) | Bemisia tabaci | btab |
| 7038 | Bemisia tabaci (SSA1-SG1 NG) genes (SSA1SG1_Nigeria_n4493_656Mb) | Bemisia tabaci | btab |
| 7038 | Bemisia tabaci (SSA1-SG1 UG) genes (SSA1_SG1_Uganda_n955_657Mb) | Bemisia tabaci | btab |
| 7038 | Bemisia tabaci (SSA2 NG) genes (SSA2_Nigeria_n785_625mb) | Bemisia tabaci | btab |
| 7038 | Bemisia tabaci (SSA3 NG) genes (SSA3_Nigeria_2278n_648mb) | Bemisia tabaci | btab |
| 7038 | Bemisia tabaci (Sweetpotato Uganda) genes (SweetPotato_whitefly_n5713_630Mb) | Bemisia tabaci | btab |
| 30195 | Bombus terrestris genes (Bter_1.0) | Bombus terrestris | bter |
| 6238 | Caenorhabditis briggsae genes (CB4) | Caenorhabditis briggsae | cbr |
| 79782 | Cimex lectularius genes (ClecH1) | Cimex lectularius | clec |
| 7176 | Culex quinquefasciatus genes (CpipJ2) | Culex quinquefasciatus | cqu |
| 29159 | Crassostrea gigas genes (oyster_v9) | Crassostrea gigas | crg |
| 7217 | Drosophila ananassae (TSC#14024-0371.13) genes (dana_caf1_) | Drosophila ananassae | dan |
| 7220 | Drosophila erecta (TSC#14021-0224.01) genes (dere_caf1_) | Drosophila erecta | der |
| 7222 | Drosophila grimshawi (TSC#15287-2541.00) genes (dgri_caf1_) | Drosophila grimshawi | dgr |
| 7230 | Drosophila mojavensis (TSC#15081-1352.22) genes (dmoj_caf1_) | Drosophila mojavensis | dmo |
| 77166 | Dendroctonus ponderosae genes (DendPond_male_1.0) | Dendroctonus ponderosae | dpa |
| 7234 | Drosophila persimilis (MSH-3) genes (dper_caf1_) | Drosophila persimilis | dpe |
| 13037 | Danaus plexippus genes (Dpv3) | Danaus plexippus | dpl |
| 46245 | Drosophila pseudoobscura pseudoobscura (MV2-25) genes (Dpse_3.0_) | Drosophila pseudoobscura pseudoobscura | dpo |
| 6669 | Daphnia pulex genes (V1.0) | Daphnia pulex | dpx |
| 7238 | Drosophila sechellia (Rob3c) genes (dsec_caf1_) | Drosophila sechellia | dse |
| 7240 | Drosophila simulans (w501) genes (ASM75419v3_) | Drosophila simulans | dsi |
| 7244 | Drosophila virilis (TSC#15010-1051.87) genes (dvir_caf1_) | Drosophila virilis | dvi |
| 7260 | Drosophila willistoni (TSC#14030-0811.24) genes (dwil_caf1_) | Drosophila willistoni | dwi |
| 7245 | Drosophila yakuba (Tai18E2) genes (dyak_caf1_) | Drosophila yakuba | dya |
| 158441 | Folsomia candida str. VU population genes (ASM221717v1) | Folsomia candida str. VU population | fcd |
| 6412 | Helobdella robusta genes (Helro1) | Helobdella robusta | hro |
| 6945 | Ixodes scapularis (ISE6) genes (IscaI1) | Ixodes scapularis | isc |
| 6945 | Ixodes scapularis genes (IscaW1) | Ixodes scapularis | isc |
| 7574 | Lingula anatina genes (LinAna1.0) | Lingula anatina | lak |
| 7375 | Lucilia cuprina genes (ASM118794v1) | Lucilia cuprina | lcq |
| 225164 | Lottia gigantea genes (Lotgi1) | Lottia gigantea | lgi |
| 7209 | Loa loa genes (Loa_loa_V3) | Loa loa | loa |
| 7370 | Musca domestica genes (MdomA1) | Musca domestica | mde |
| 6526 | Biomphalaria glabrata genes (BglaB1) | Biomphalaria glabrata | myg |
| 45351 | Nematostella vectensis genes (ASM20922v1) | Nematostella vectensis | nve |
| 7425 | Nasonia vitripennis (AsymCx) genes (Nvit_psr_1.1) | Nasonia vitripennis | nvi |
| 37653 | Octopus bimaculoides genes (PRJNA270931) | Octopus bimaculoides | obi |
| 121224 | Pediculus humanus genes (PhumU2) | Pediculus humanus corporis | phu |
| 6183 | Schistosoma mansoni genes (ASM23792v2) | Schistosoma mansoni | smm |
| 13686 | Solenopsis invicta genes (Si_gnH) | Solenopsis invicta | soc |
| 7668 | Strongylocentrotus purpuratus (Spur 01) genes (Spur_5.0) | Strongylocentrotus purpuratus | spu |
| 10228 | Trichoplax adhaerens genes (ASM15027v1) | Trichoplax adhaerens | tad |
| 7070 | Tribolium castaneum genes (Tcas5.2) | Tribolium castaneum | tca |
| 6334 | Trichinella spiralis genes (Tspiralis1) | Trichinella spiralis | tsp |
| 32264 | Tetranychus urticae genes (ASM23943v1) | Tetranychus urticae | tut |
| 37001 | Glossina brevipalpis genes (GbreI1) | Glossina brevipalpis | wbr |
| 37546 | Glossina morsitans genes (GmorY1) | Glossina morsitans morsitans | wgl |
| 136037 | Zootermopsis nevadensis genes (ZooNev1.0) | Zootermopsis nevadensis | zne |
| 104782 | Adineta vaga genes (AMS_PRJEB1171_v1) | Adineta vaga | |
| 7167 | Anopheles albimanus genes (AalbS2) | Anopheles albimanus | |
| 7173 | Anopheles arabiensis genes (AaraD1) | Anopheles arabiensis | |
| 41427 | Anopheles atroparvus genes (AatrE3) | Anopheles atroparvus | |
| 43041 | Anopheles christyi genes (AchrA1) | Anopheles christyi | |
| 1518534 | Anopheles coluzzii (Ngousso) genes (AcolN1) | Anopheles coluzzii | |
| 1518534 | Anopheles coluzzii genes (AcolM1) | Anopheles coluzzii | |
| 139723 | Anopheles culicifacies genes (AculA1) | Anopheles culicifacies | |
| 43151 | Anopheles darlingi genes (AdarC3) | Anopheles darlingi | |
| 7168 | Anopheles dirus genes (AdirW1) | Anopheles dirus | |
| 199890 | Anopheles epiroticus genes (AepiE1) | Anopheles epiroticus | |
| 69004 | Anopheles farauti genes (AfarF2) | Anopheles farauti | |
| 62324 | Anopheles funestus genes (AfunF3) | Anopheles funestus | |
| 74869 | Anopheles maculatus genes (AmacM1) | Anopheles maculatus | |
| 34690 | Anopheles melas genes (AmelC2) | Anopheles melas | |
| 30066 | Anopheles merus genes (AmerM2) | Anopheles merus | |
| 112268 | Anopheles minimus genes (AminM1) | Anopheles minimus | |
| 34691 | Anopheles quadriannulatus genes (AquaS1) | Anopheles quadriannulatus | |
| 74873 | Anopheles sinensis (China) genes (AsinC2) | Anopheles sinensis | |
| 74873 | Anopheles sinensis genes (AsinS2) | Anopheles sinensis | |
| 30069 | Anopheles stephensi (Indian) genes (AsteI2) | Anopheles stephensi | |
| 30069 | Anopheles stephensi genes (AsteS1) | Anopheles stephensi | |
| 217634 | Anoplophora glabripennis genes (Agla_1.0) | Anoplophora glabripennis | |
| 315563 | Belgica antarctica genes (ASM77530v1) | Belgica antarctica | |
| 7740 | Branchiostoma lanceolatum genes (BraLan2) | Branchiostoma lanceolatum | |
| 135651 | Caenorhabditis brenneri genes (C_brenneri-6.0.1b) | Caenorhabditis brenneri | |
| 281687 | Caenorhabditis japonica genes (C_japonica-7.0.1) | Caenorhabditis japonica | |
| 31234 | Caenorhabditis remanei genes (C_remanei-15.0.1) | Caenorhabditis remanei | |
| 283909 | Capitella teleta genes (Capitella teleta v1.0) | Capitella teleta | |
| 179676 | Culicoides sonorensis genes (Cson1) | Culicoides sonorensis | |
| 35525 | Daphnia magna genes (daphmag2.4) | Daphnia magna str. Xinb3 | |
| 1965070 | Dinothrombium tinctorium genes (DtinU1) | Dinothrombium tinctorium | |
| 7395 | Glossina austeni genes (GausT1) | Glossina austeni | |
| 201502 | Glossina fuscipes fuscipes genes (GfusI1) | Glossina fuscipes fuscipes | |
| 7398 | Glossina pallidipes genes (GpalI1) | Glossina pallidipes | |
| 67801 | Glossina palpalis genes (GpapI1) | Glossina palpalis gambiensis | |
| 34740 | Heliconius melpomene genes (Hmel1) | Heliconius melpomene | |
| 442651 | Hofstenia miamia genes (HmiaM1) | Hofstenia miamia | |
| 72036 | Lepeophtheirus salmonis genes (LSalAtl2s) | Lepeophtheirus salmonis | |
| 299467 | Leptotrombidium deliense genes (LdelU1) | Leptotrombidium deliense | |
| 7200 | Lutzomyia longipalpis genes (LlonJ1) | Lutzomyia longipalpis | |
| 39758 | Mayetiola destructor genes (Mdes_1.0) | Mayetiola destructor | |
| 36166 | Megaselia scalaris genes (Msca1) | Megaselia scalaris | |
| 113334 | Melitaea cinxia genes (MelCinx1.0) | Melitaea cinxia | |
| 27923 | Mnemiopsis leidyi genes (MneLei_Aug2011) | Mnemiopsis leidyi | |
| 6282 | Onchocerca volvulus genes (ASM49940v2) | Onchocerca volvulus | |
| 48709 | Orchesella cincta genes (ASM171814v1) | Orchesella cincta | |
| 29031 | Phlebotomus papatasi genes (PpapI1) | Phlebotomus papatasi | |
| 54126 | Pristionchus pacificus genes (El_Paco) | Pristionchus pacificus | |
| 13249 | Rhodnius prolixus genes (RproC3) | Rhodnius prolixus | |
| 52283 | Sarcoptes scabiei genes (SscaA1) | Sarcoptes scabiei | |
| 407821 | Stegodyphus mimosarum genes (Stegodyphus_mimosarum_v1) | Stegodyphus mimosarum | |
| 35570 | Stomoxys calcitrans genes (ScalU1) | Stomoxys calcitrans | |
| 126957 | Strigamia maritima genes (Smar1) | Strigamia maritima | |
| 34506 | Strongyloides ratti genes (S_ratti_ED321_v5_0_4) | Strongyloides ratti | |
| 139649 | Teleopsis dalmanni genes (Tel_dalmanni_2A_v1.0) | Teleopsis dalmanni | |
| 669202 | Thelohanellus kitauei genes (ASM82789v1) | Thelohanellus kitauei |
iDEP: Gain Insights from RNA-seq 